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创建页面，内容为“{{short description|Preprint service}} {{Infobox website | name = bioRxiv | logo = BioRxiv logo.png | screenshot = | caption = | url = {{URL|http://biorxiv.org/}} | commercial = No | type = Science | language = English | registration = | owner = Cold Spring Harbor Laboratory | author = | launch_date = {{start date and age|2013|11|}} | current_status = Online | oclc…”

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{{short description|Preprint service}}
{{Infobox website
| name = bioRxiv
| logo = BioRxiv logo.png
| screenshot =
| caption =
| url = {{URL|http://biorxiv.org/}}
| commercial = No
| type = Science
| language = English
| registration =
| owner = [[Cold Spring Harbor Laboratory]]
| author =
| launch_date = {{start date and age|2013|11|}}
| current_status = Online
| oclc =
| issn =
| revenue =
}}
{{lowercase title}}
'''bioRxiv''' (pronounced "bio-archive"<ref name=About>{{cite web |title=Advancing the sharing of research results for the life sciences |url=https://www.biorxiv.org/about-biorxiv |publisher=bioRxiv |access-date=2018-12-12}}</ref><ref>{{Cite journal |last1=Sever |first1=Richard |last2=Roeder |first2=Ted |last3=Hindle |first3=Samantha |last4=Sussman |first4=Linda |last5=Black |first5=Kevin-John |last6=Argentine |first6=Janet |last7=Manos |first7=Wayne |last8=Inglis |first8=John R. |date=November 6, 2019 |journal=bioRxiv |access-date=April 23, 2022 |title=bioRxiv: the preprint server for biology |url=https://www.biorxiv.org/content/10.1101/833400v1 |language=en |pages=833400 |doi=10.1101/833400 |s2cid=209580681}}</ref>) is an [[open access]] [[preprint]] [[disciplinary repository|repository]] for the [[biological sciences]] co-founded by [[John R. Inglis|John Inglis]] and [[Richard Sever]] in November 2013.<ref name=Nature1>{{cite journal |last1=Callaway |first1=Ewen |title=Preprints come to life |journal=[[Nature (journal)|Nature]] |date=12 November 2013 |volume=503 |issue=7475 |page=180 |doi=10.1038/503180a |pmid=24226869 |doi-access=free|bibcode=2013Natur.503..180C }}</ref><ref>{{cite web |author=Cold Spring Harbor Laboratory |title=bioRxiv preprints can now be submitted directly to leading research journals |url=https://phys.org/news/2016-01-biorxiv-preprints-submitted-journals.html |website=[[PhysOrg]] |access-date=2018-03-17}}</ref> It is hosted by the [[Cold Spring Harbor Laboratory]] (CSHL).<ref>{{cite web |title=About bioRxiv |url=http://biorxiv.org/about-biorxiv |work=bioRxiv |publisher=[[Cold Spring Harbor Laboratory]] |access-date=2016-09-07}}</ref>

As preprints, papers hosted on bioRxiv are not [[peer-review]]ed, but undergo basic screening and checked against plagiarism. However, peer reviews from other sources may be posted alongside preprints. Moreover, readers may post comments.

It has been measured that two thirds of the papers posted in bioRxiv are later published in peer-reviewed journals.<ref name="rxivist_elife">{{cite journal|title=Meta-Research, Tracking the popularity and outcomes of all bioRxiv preprints|journal=[[eLife]]|last1=Abdill|first1=Richard J|date=24 April 2019|volume=8|pages=e45133|doi=10.7554/eLife.45133|pmid=31017570 |pmc=6510536 |s2cid=129944106 |doi-access=free }}</ref> BioRxiv, and its sister site, medRxiv, have been major sources for the dissemination of [[COVID-19]] research.<ref>{{Cite news|last=Yan|first=Wudan|date=2020-04-14|title=Coronavirus Tests Science's Need for Speed Limits|language=en-US|work=The New York Times|url=https://www.nytimes.com/2020/04/14/science/coronavirus-disinformation.html|access-date=2020-05-01|issn=0362-4331}}</ref><ref>{{Cite web|last=Koerth|first=Maggie|date=2021-07-08|title=How Science Moved Beyond Peer Review During The Pandemic|url=https://fivethirtyeight.com/features/how-science-moved-beyond-peer-review-during-the-pandemic/|access-date=2021-08-07|website=FiveThirtyEight|language=en-US}}</ref>

==History==

BioRxiv was inspired by and intends to complement the [[arXiv]] repository, which mostly focuses on [[mathematics]], [[physics]] and connected disciplines, launched in 1991 by [[Paul Ginsparg]] (who also serves on the bioRxiv advisory board). It received support from both the CSHL and the [[Lourie Foundation]].<ref name=ASAPbio>{{cite web |last1=Inglis |first1=John R. |last2=Sever |first2=Richard |date=12 February 2016 |title=bioRxiv: a progress report |url=http://asapbio.org/biorxiv |work=[[ASAPbio]]|access-date=2016-09-11}}</ref> Additional funding from the [[Chan Zuckerberg Initiative]] was confirmed in April 2017.<ref>{{Cite journal |last=Callaway |first=Ewen |title=BioRxiv preprint server gets cash boost from Chan Zuckerberg Initiative |journal=Nature |volume=545 |issue=7652 |pages=18 |language=en |doi=10.1038/nature.2017.21894|pmid=28470210 |bibcode=2017Natur.545...18C |year=2017 |doi-access=free }}</ref><ref>{{cite journal |last1=Kaiser |first1=Jocelyn |title=BioRxiv preprint server gets funding from Chan Zuckerberg Initiative |journal=Science |date=26 April 2017 |doi=10.1126/science.aal1117}}</ref>

Prior to the establishment of bioRxiv, biological scientists were divided on the issue of having a dedicated preprint [[open-access repository]].<ref name=Nature1/> Many had concerns of having their research [[scoop (news)|scooped]] by competitors and losing their claim to [[discovery (observation)|discovery]]. However, several geneticists had submitted papers to the "[[quantitative biology]]" section of the arXiv repository (launched in 2003) and no longer had those concerns, as they could point to preprints to support their claims of discovery.<ref name=Nature1/><ref name=Nature2>{{cite journal |last1=Callaway |first1=Ewen |title=Geneticists eye the potential of arXiv |journal=[[Nature (journal)|Nature]] |date=31 July 2012 |volume=488 |issue=7409 |page=19 |doi=10.1038/488019a |doi-access=free |pmid=22859182|bibcode=2012Natur.488...19C }}</ref>

==Submission rate==

Jocelyn Kaiser of ''[[Science (journal)|Science]]'' said that in its first year, the repository had "attracted a modest but growing stream of papers", having hosted 824 preprints.<ref name=Science>{{cite web |last=Kaiser |first=Jocelyn |date=11 November 2014 |title=BioRxiv at 1 year: A promising start |url=https://www.science.org/content/article/biorxiv-1-year-promising-start |work=[[Science (journal)|Science]] |access-date=2016-09-07}}</ref>
Over 20,000 [[Twitter|tweets]] were made about bioRxiv-hosted preprints in 2015.<ref name=ASAPbio/>

As of February 2016, the submission rate to bioRxiv had steadily increased from ≈60 to ≈200 per month.<ref name=ASAPbio/> In 2017, the number of monthly submissions rose from over 800 in March<ref>{{Cite news|url=https://twitter.com/JohnRInglis/status/836809771722366978|title=John Inglis on Twitter|work=Twitter|access-date=2017-03-01|language=en}}</ref> to more than 1000 in July<ref name=JohnInglisTweet>{{cite web|url=https://twitter.com/JohnRInglis/status/880996280616484864|title=A life sci #preprint milestone: @biorxivpreprint's first >1000 ms month. Thanks to authors, affiliates, and staff for making it happen|last=Inglis|first=John|date=2017-06-30|website=@JohnRInglis|access-date=2017-07-02}}</ref> with a total number of 10,722 papers submitted in 2017.<ref>{{cite web|url=https://www.biorxiv.org/search/limit_from:2017-01-01%20limit_to:2017-12-31%20numresults:10%20sort:relevance-rank%20format_result:standard|title=Search Results {{!}} bioRxiv|website=biorxiv.org|language=en|access-date=2018-10-22}}</ref>

In the year of 2018, a total of 20,000 manuscripts were submitted, which results in a monthly average of 1600 papers.<ref name="urlSearch2018">{{cite web |url=https://www.biorxiv.org/search/limit_from:2018-01-01%20limit_to:2018-12-31%20numresults:10%20sort:relevance-rank%20format_result:standard |title=Search Results | bioRxiv }}</ref>

In the year 2019, over 31,000 manuscripts were submitted, which results in a monthly average of 2600 papers (which accelerated to just over 3000 papers per month in the last quarter of 2019).<ref name="urlSearch2019">{{cite web |url=https://www.biorxiv.org/search/limit_from:2019-01-01%20limit_to:2019-12-31%20numresults:10%20sort:relevance-rank%20format_result:standard |title=Search Results | bioRxiv }}</ref>

The number of yearly manuscripts rose to 38,088 in 2020, then slightly increased to 40,223 in 2021, followed by 36,417 manuscripts being published in 2022. As of December 31, 2022, almost 180,000 preprints have been accepted in total.<ref>{{cite web|url=https://www.biorxiv.org/search/limit_from:2010-01-01%20limit_to:2019-12-31%20numresults:10%20sort:relevance-rank%20format_result:standard|title=Search Results {{!}} bioRxiv|website=biorxiv.org|language=en|access-date=2020-01-21}}</ref>

==Fields==

bioRxiv accepts preprints in the following disciplines
{{columns-list|colwidth=20em|
*[[Animal behavior]] and [[animal cognition|cognition]]
*[[Biochemistry]]
*[[Bioengineering]]
*[[Bioinformatics]]
*[[Biophysics]]
*[[Cancer]] biology
*[[Cell biology]]
*[[Clinical trial]]s
*[[Developmental biology]]
*[[Ecology]]
*[[Epidemiology]]
*[[Evolutionary biology]]
*[[Genetics]]
*[[Genomics]]
*[[Immunology]]
*[[Microbiology]]
*[[Molecular biology]]
*[[Neuroscience]]
*[[Paleontology]]
*[[Pathology]]
*[[Pharmacology]] and [[Toxicology]]
*[[Physiology]]
*[[Botany|Plant biology]]
*[[Scientific communication]] and [[Science education|education]]
*[[Synthetic biology]]
*[[Systems biology]]
*[[Zoology]]
}}

==bioRxiv, journals, and [[open peer review]] ==

As a result of bioRxiv's popularity, many biology journals have updated their policies on preprints,<ref name=ASAPbio/><ref name=Science/> clarifying they do not consider preprints to be a 'prior publication' for purpose of the [[Ingelfinger rule]].

The bioRxiv to Journals (B2J) initiative allows authors to submit their manuscript directly to a journal's submission system through bioRxiv. As of May 2020, 177 journals participate in the initiative.<ref name=About/>

In 2019, BioRxiv started allowing posting reviews alongside preprints, in addition to allowing comments on preprints. The reviews can come from journals or from platforms such as Review Commons.<ref name="Brainard"/>

==See also==
* [[List of preprint repositories]]
* [[ArXiv]]
* [[ChemRxiv]]
* [[MedRxiv]]
* [[PeerJ Preprints]]

==References==
{{Reflist|refs=
<ref name="Brainard">{{cite journal | last=Brainard | first=Jeffrey | title=In bid to boost transparency, bioRxiv begins posting peer reviews next to preprints | journal=Science | publisher=American Association for the Advancement of Science (AAAS) | date=2019-10-10 | issn=0036-8075 | doi=10.1126/science.aaz8160 | s2cid=211766434 }}</ref>
}}

==Further reading==
* {{cite web |last=Jansen |first=Jaclyn |date=12 November 2013 |title=CSHL launches bioRxiv, a freely accessible, citable preprint server for biology |url=http://www.cshl.edu/news-and-features/cshl-launches-biorxiv-a-freely-accessible-citable-preprint-server-for-biology.html |publisher=[[Cold Spring Harbor Laboratory]] |access-date=2016-09-11 |archive-url=https://web.archive.org/web/20161220100805/http://www.cshl.edu/news-and-features/cshl-launches-biorxiv-a-freely-accessible-citable-preprint-server-for-biology.html |archive-date=20 December 2016 |url-status=dead |df=dmy-all }}
* {{cite journal |last=Kaiser |first=Jocelyn |date=12 November 2013 |title=New Preprint Server Aims to Be Biologists' Answer to Physicists' arXiv |journal=[[Science (journal)|Science]] |url=https://www.science.org/content/article/new-preprint-server-aims-be-biologists-answer-physicists-arxiv |access-date=2016-10-30}}
* {{cite web |date=15 November 2013 |title=BioRxiv preprint server launched |url=http://news.lib.berkeley.edu/2013/11/15/ |work=UC Berkeley Library News |access-date=2016-09-11 }}{{Dead link|date=October 2023 |bot=InternetArchiveBot |fix-attempted=yes }}
* {{cite journal |last1=Callaway |first1=Ewen |last2=Powell |first2=Kendall |date=16 February 2016 |title=Biologists urged to hug a preprint |journal=[[Nature (journal)|Nature]] |volume=530 |issue=7590 |pages=265 |doi=10.1038/530265a|pmid=26887471 |bibcode=2016Natur.530..265C |doi-access=free }}
* {{cite web |last=Inglis |first=John |date=22 September 2016 |title=The bioRxiv preprint service |url=https://oaspa.org/wp-content/uploads/2016/10/John-Inglis-COASP-2016-bioRxiv-presentation.pdf |work=COASP 2016 }}

==External links==
{{Wikidata property|P3951|P6660|P6661}}
* {{Official website|http://biorxiv.org}}

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